Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDGFBP01127 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDGFBP01127 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDGFBP01127 OLA1P2-201ENST00000395519 1264 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.43□□□□□ -0.1
PDGFBP01127 AC098657.1-201ENST00000416270 1135 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 PSAT1P2-201ENST00000426107 972 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFBP01127 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFBP01127 AC087203.1-201ENST00000532111 1181 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 AC078814.4-201ENST00000546650 327 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.43□□□□□ -0.1
PDGFBP01127 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFBP01127 AC140658.4-201ENST00000561990 352 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 AC120498.7-201ENST00000562876 330 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 AL591424.3-201ENST00000614278 872 ntBASIC14.43□□□□□ -0.1
PDGFBP01127 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFBP01127 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PDGFBP01127 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.42□□□□□ -0.1
PDGFBP01127 AC138761.6-201ENST00000583997 1423 ntBASIC14.42□□□□□ -0.1
PDGFBP01127 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.42□□□□□ -0.1
PDGFBP01127 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.42□□□□□ -0.1
PDGFBP01127 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.42□□□□□ -0.1
PDGFBP01127 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 AL009176.1-201ENST00000607876 650 ntBASIC14.42□□□□□ -0.1
PDGFBP01127 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms