Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PPP1R3DO95685 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 AL391280.1-201ENST00000506969 1062 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 SORD2P-201ENST00000558556 1069 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 LINC02560-201ENST00000596379 459 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 ENPP7P14-201ENST00000621765 1040 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 AC005252.3-201ENST00000623855 2258 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.26□□□□□ -0.29
PPP1R3DO95685 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PPP1R3DO95685 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PPP1R3DO95685 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PPP1R3DO95685 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PPP1R3DO95685 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PPP1R3DO95685 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.26□□□□□ -0.29
PPP1R3DO95685 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 TMEM198B-204ENST00000484016 896 ntBASIC13.25□□□□□ -0.29
PPP1R3DO95685 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC140912.1-201ENST00000577171 1054 ntBASIC13.25□□□□□ -0.29
PPP1R3DO95685 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 AL096865.1-201ENST00000606796 927 ntBASIC13.25□□□□□ -0.29
PPP1R3DO95685 AL033527.5-201ENST00000641382 801 ntBASIC13.25□□□□□ -0.29
PPP1R3DO95685 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PPP1R3DO95685 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.25□□□□□ -0.29
PPP1R3DO95685 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP1R3DO95685 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.24□□□□□ -0.29
PPP1R3DO95685 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms