Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 AL355102.3-201ENST00000554299 1678 ntBASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 TUBB8P4-201ENST00000511806 1324 ntBASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC9.27□□□□□ -0.92
TMEM256-PLSCR3K7ERE1 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 HLA-H-201ENST00000383620 1096 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AC004066.1-201ENST00000502488 802 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 SLED1-202ENST00000512051 380 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AC023141.13-201ENST00000604991 943 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AL732292.2-201ENST00000609649 430 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AC133561.5-201ENST00000635547 218 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 LINC00567-201ENST00000569854 3409 ntBASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms