Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AC018665.1-201ENST00000622927 1362 ntBASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SPDYE21P-201ENST00000413323 827 ntBASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ABCD1P5-201ENST00000445663 754 ntBASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AL591684.3-201ENST00000605187 298 ntBASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 BX537318.2-201ENST00000624893 4162 ntBASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CTAGE10P-201ENST00000318353 2408 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FP325332.1-201ENST00000624818 2045 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LINC00538-201ENST00000626109 1906 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AL359845.1-201ENST00000458202 1648 ntBASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.74□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms