Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC008158.1-201ENST00000578759 3668 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 NTRK2-204ENST00000359847 6646 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC124319.4-201ENST00000622931 2161 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 LONP2-201ENST00000285737 8199 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC138969.3-201ENST00000546612 1459 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC138932.2-201ENST00000548268 1459 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC126755.4-201ENST00000549796 1459 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC024075.2-201ENST00000598112 1473 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC069152.1-201ENST00000438030 544 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 GUSBP6-202ENST00000438529 1198 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 TK2-204ENST00000525974 1178 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 MIR6821-201ENST00000617625 74 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC9A3P2-201ENST00000447821 2021 ntBASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 C2-209ENST00000452323 1999 ntTSL 2 BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 CHML-201ENST00000366553 7594 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
CHKB-CPT1BH3BT56 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms