Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FAM86JP-202ENST00000484500 988 ntBASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 CCNL2P1-201ENST00000512846 969 ntBASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AL359219.1-201ENST00000556311 934 ntBASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 NAT9-204ENST00000578822 839 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC148476.1-201ENST00000622182 705 ntBASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC090616.6-203ENST00000579186 1945 ntBASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 RPL3P2-204ENST00000413027 1203 ntBASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AC103563.1-201ENST00000429316 123 ntBASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 GYG1-209ENST00000483267 801 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AC021321.1-201ENST00000607397 1113 ntBASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM88BA6NKF7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 RPL4P6-201ENST00000438116 1304 ntBASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 RN7SL69P-201ENST00000468423 272 ntBASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 AC106782.5-201ENST00000616011 337 ntBASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 AC009041.4-201ENST00000620075 638 ntBASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM88BA6NKF7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms