Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 MIR645-201ENST00000385283 94 ntBASIC12.71□□□□□ -0.37
MBD3L3A6NE82 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 RPL17P11-201ENST00000417593 544 ntBASIC12.71□□□□□ -0.37
MBD3L3A6NE82 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 AC104784.1-201ENST00000473096 294 ntBASIC12.71□□□□□ -0.37
MBD3L3A6NE82 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.71□□□□□ -0.38
MBD3L3A6NE82 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MBD3L3A6NE82 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 AC092978.1-202ENST00000637590 1327 ntBASIC12.7□□□□□ -0.38
MBD3L3A6NE82 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 ALG1L13P-202ENST00000519320 584 ntBASIC12.7□□□□□ -0.38
MBD3L3A6NE82 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 AP001184.1-201ENST00000637936 376 ntBASIC12.7□□□□□ -0.38
MBD3L3A6NE82 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 LINC01815-202ENST00000641468 1409 ntBASIC12.7□□□□□ -0.38
MBD3L3A6NE82 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.7□□□□□ -0.38
MBD3L3A6NE82 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms