Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 PPT1-213ENST00000641319 2388 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TPM3P8-201ENST00000330554 643 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 POM121L8P-201ENST00000417732 1281 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 KRT43P-201ENST00000434019 910 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 POM121L9P-203ENST00000441984 1285 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AC005225.4-201ENST00000557330 545 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AC132938.2-201ENST00000579188 680 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 GNRHR2-203ENST00000581100 1187 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 BTNL10-201ENST00000595971 695 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 IGHV3-72-202ENST00000621503 303 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AC132938.4-201ENST00000623835 848 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AL591163.1-201ENST00000641757 987 ntBASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms