Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 PCDHA9-201ENST00000378122 6900 ntBASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC7.45□□□□□ -1.22
LINC01558Q9Y6Z2 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AL162615.1-201ENST00000429893 1653 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 KRASP1-201ENST00000407852 552 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 KRT18P5-201ENST00000436075 1291 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AK2P2-201ENST00000439142 405 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AC084262.1-201ENST00000567818 751 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 FAM90A17P-201ENST00000533716 1957 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms