Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AC091046.1-201ENST00000331871 207 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 PRKXP1-201ENST00000561423 1122 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AF254983.2-201ENST00000612331 135 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 MIR6769A-201ENST00000617340 73 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AGAP7P-201ENST00000582299 2062 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AGAP14-201ENST00000624701 2060 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AC242376.1-201ENST00000559033 726 ntBASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 LINC01783-202ENST00000614408 828 ntBASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 BX284668.2-205ENST00000619677 828 ntBASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 KRT8P28-201ENST00000433288 1390 ntBASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTDP1Q9Y5B0 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 TSPY25P-201ENST00000429463 745 ntBASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 XBP1P1-201ENST00000436573 652 ntBASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms