Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 ISCA2P1-201ENST00000425548 448 ntBASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSX2IPQ9Y2D8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 FAM90A7P-201ENST00000382628 1395 ntBASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 FAM90A23P-201ENST00000400136 1395 ntBASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 PRKXP1-201ENST00000561423 1122 ntBASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MIR4706-201ENST00000582134 82 ntBASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 AC006453.1-201ENST00000636037 1257 ntBASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 Z98259.2-201ENST00000641583 609 ntBASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX2IPQ9Y2D8 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 ZBED1P1-201ENST00000502364 1930 ntBASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 MBLAC2-202ENST00000514906 1936 ntBASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 AC239868.1-201ENST00000369385 493 ntBASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms