Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL035414.1-201ENST00000451327 857 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 KRT17P7-201ENST00000451704 1104 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 HAUS1P1-201ENST00000505275 832 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL354989.2-201ENST00000435838 1540 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 MTCO1P15-201ENST00000529569 1526 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 KHSRPP1-201ENST00000427983 1768 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AL590440.2-201ENST00000641973 1595 ntBASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AC004945.1-201ENST00000416738 983 ntBASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 CNN2P8-201ENST00000421872 913 ntBASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 OR10B1P-201ENST00000601666 907 ntBASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AC020658.4-201ENST00000613987 684 ntBASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 AC138951.2-201ENST00000623455 1161 ntBASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS9D1Q9Y2B5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 INE2-201ENST00000630399 1874 ntBASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS9D1Q9Y2B5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms