Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ELK2AP-201ENST00000392510 1007 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 OR2R1P-201ENST00000441404 914 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC104629.1-201ENST00000494226 508 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 RERG-205ENST00000537647 935 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AL132994.2-201ENST00000603120 687 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC106872.11-201ENST00000605838 421 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 BX088702.1-201ENST00000610784 235 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR6842-201ENST00000612539 65 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC048344.4-201ENST00000619744 527 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC128714.1-201ENST00000637035 887 ntBASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC4.96□□□□□ -1.62
KRTAP4-3Q9BYR4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms