Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 BCRP4-201ENST00000506079 804 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 AC100858.1-201ENST00000514059 1228 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 AC092612.1-201ENST00000514501 998 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PTPN18Q99952 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PTPN18Q99952 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN18Q99952 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN18Q99952 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN18Q99952 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN18Q99952 AC104961.1-201ENST00000427605 771 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN18Q99952 AC092903.1-201ENST00000466506 262 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 RN7SL147P-201ENST00000487345 298 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 AC087203.1-201ENST00000532111 1181 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN18Q99952 RN7SL556P-201ENST00000582856 298 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.39■□□□□ 0.21
PTPN18Q99952 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN18Q99952 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN18Q99952 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN18Q99952 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTPN18Q99952 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PTPN18Q99952 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PTPN18Q99952 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.38■□□□□ 0.21
PTPN18Q99952 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTPN18Q99952 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 AC092896.1-201ENST00000465850 380 ntBASIC16.38■□□□□ 0.21
PTPN18Q99952 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN18Q99952 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN18Q99952 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN18Q99952 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN18Q99952 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.38■□□□□ 0.21
PTPN18Q99952 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN18Q99952 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PTPN18Q99952 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.38■□□□□ 0.21
PTPN18Q99952 AL136982.5-201ENST00000605222 294 ntBASIC16.38■□□□□ 0.21
PTPN18Q99952 AC005274.1-201ENST00000623460 802 ntBASIC16.38■□□□□ 0.21
PTPN18Q99952 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN18Q99952 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN18Q99952 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms