Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 KRT8P12-202ENST00000472924 1397 ntBASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP6Q96FZ7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 PCDHA5-203ENST00000614258 4248 ntBASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 HLA-K-203ENST00000430151 1046 ntBASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 GPS2P2-201ENST00000430745 888 ntBASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 RN7SL828P-201ENST00000607615 303 ntBASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP6Q96FZ7 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AL035456.1-201ENST00000456064 1369 ntBASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms