Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 HMGN1P19-201ENST00000436976 333 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC007551.1-201ENST00000457394 519 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 TMEM198B-204ENST00000484016 896 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC078819.1-201ENST00000547454 765 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC012085.1-201ENST00000548270 765 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AL596325.1-201ENST00000563991 1082 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 MIR4683-201ENST00000579659 81 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC073413.1-201ENST00000603927 732 ntBASIC15.49■□□□□ 0.07
TRIM11Q96F44 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM11Q96F44 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.49■□□□□ 0.07
TRIM11Q96F44 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM11Q96F44 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM11Q96F44 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM11Q96F44 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM11Q96F44 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM11Q96F44 AL161932.2-201ENST00000435436 679 ntBASIC15.48■□□□□ 0.07
TRIM11Q96F44 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 AL355994.2-201ENST00000447882 704 ntBASIC15.48■□□□□ 0.07
TRIM11Q96F44 CICP12-201ENST00000455801 843 ntBASIC15.48■□□□□ 0.07
TRIM11Q96F44 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM11Q96F44 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 AC104506.1-201ENST00000609247 429 ntBASIC15.48■□□□□ 0.07
TRIM11Q96F44 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM11Q96F44 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms