Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC28Q96AY4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC28Q96AY4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC28Q96AY4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AC106872.9-201ENST00000512437 1393 ntBASIC14.37□□□□□ -0.11
TTC28Q96AY4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 FAM187B2P-201ENST00000577135 713 ntBASIC14.37□□□□□ -0.11
TTC28Q96AY4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 TUBB2BP1-201ENST00000404155 871 ntBASIC14.37□□□□□ -0.11
TTC28Q96AY4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 RN7SL638P-201ENST00000494527 290 ntBASIC14.37□□□□□ -0.11
TTC28Q96AY4 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.37□□□□□ -0.11
TTC28Q96AY4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC28Q96AY4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 PGK1P2-201ENST00000431702 1214 ntBASIC14.36□□□□□ -0.11
TTC28Q96AY4 AL137077.1-201ENST00000442115 528 ntBASIC14.36□□□□□ -0.11
TTC28Q96AY4 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC113398.1-201ENST00000464124 406 ntBASIC14.36□□□□□ -0.11
TTC28Q96AY4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC007690.1-201ENST00000451924 468 ntBASIC14.36□□□□□ -0.11
TTC28Q96AY4 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 IGHV7-56-201ENST00000518372 351 ntBASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC14.36□□□□□ -0.11
TTC28Q96AY4 AC245369.8-201ENST00000636589 306 ntBASIC14.36□□□□□ -0.11
TTC28Q96AY4 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms