Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.58□□□□□ -0.23
HPS1Q92902 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HPS1Q92902 AC068760.1-201ENST00000493579 1953 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 GK-202ENST00000378941 458 ntTSL 3 BASIC13.58□□□□□ -0.24
HPS1Q92902 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 RPL37AP1-201ENST00000412502 279 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 AL353779.1-201ENST00000434793 351 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.58□□□□□ -0.24
HPS1Q92902 MTND2P25-201ENST00000449028 610 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.58□□□□□ -0.24
HPS1Q92902 AP005018.1-201ENST00000525475 301 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 AL079307.3-201ENST00000556114 283 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.58□□□□□ -0.24
HPS1Q92902 AC090950.1-202ENST00000605733 644 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
HPS1Q92902 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.58□□□□□ -0.24
HPS1Q92902 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HPS1Q92902 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HPS1Q92902 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 ACE3P-201ENST00000423435 1973 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 AL365181.3-201ENST00000605886 3222 ntBASIC13.58□□□□□ -0.24
HPS1Q92902 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HPS1Q92902 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 TRIM80P-201ENST00000455685 2848 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 MTND2P9-201ENST00000422293 931 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 PSMC1P2-201ENST00000423961 1204 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 NME2P1-201ENST00000426182 414 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.57□□□□□ -0.24
HPS1Q92902 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC13.57□□□□□ -0.24
HPS1Q92902 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 AL596325.1-201ENST00000563991 1082 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 AL133215.2-201ENST00000609242 977 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 AL844908.2-201ENST00000609461 460 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms