Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AL512631.1-201ENST00000604086 840 ntBASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AL117335.1-201ENST00000620919 678 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL603832.2-201ENST00000566195 2125 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 RHOC-205ENST00000369636 786 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC018620.1-201ENST00000523233 379 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 FTH1-205ENST00000529631 507 ntTSL 4 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SNORA50D-202ENST00000627561 132 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 FHL1-229ENST00000629039 1501 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL133373.2-201ENST00000623187 2828 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC093503.3-201ENST00000624917 2352 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 USP8-219ENST00000625664 1568 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC016956.1-201ENST00000393026 1108 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC145285.5-201ENST00000562217 361 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 DEFA1-202ENST00000382692 485 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL160291.1-201ENST00000574842 1002 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 BX664727.2-201ENST00000420308 228 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 LINC01231-201ENST00000452746 886 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 HKR1-222ENST00000591417 525 ntTSL 4 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CLEC4M-210ENST00000597522 811 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SIGLEC22P-201ENST00000599104 714 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL121658.1-201ENST00000608489 712 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CR848007.3-201ENST00000615762 228 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC008622.3-201ENST00000621170 600 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL513478.1-201ENST00000621265 228 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC004233.4-201ENST00000621689 417 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms