Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CFAP61Q8NHU2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.95□□□□□ -0.02
CFAP61Q8NHU2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP61Q8NHU2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC055811.4-201ENST00000624039 1754 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 RNU1-114P-201ENST00000365297 166 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC104457.1-201ENST00000401024 814 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 RN7SL837P-201ENST00000463010 287 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC132938.2-201ENST00000579188 680 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 CLUHP6-201ENST00000580789 941 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC010319.3-201ENST00000597028 470 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 AL591163.1-201ENST00000641757 987 ntBASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP61Q8NHU2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 AL360270.3-201ENST00000609118 1348 ntBASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 AC093433.1-201ENST00000458048 571 ntBASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 TDH-203ENST00000531764 1110 ntBASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 KRT8P24-201ENST00000560290 1559 ntBASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP61Q8NHU2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms