Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 AC095040.1-201ENST00000513286 675 ntBASIC22.4■■□□□ 1.18
VPS8Q8N3P4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 KLF17P1-201ENST00000547105 1126 ntBASIC22.4■■□□□ 1.18
VPS8Q8N3P4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 AC103691.2-201ENST00000618824 433 ntBASIC22.4■■□□□ 1.18
VPS8Q8N3P4 AC242376.2-201ENST00000619355 883 ntBASIC22.4■■□□□ 1.18
VPS8Q8N3P4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC22.39■■□□□ 1.18
VPS8Q8N3P4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS8Q8N3P4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC22.39■■□□□ 1.18
VPS8Q8N3P4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
VPS8Q8N3P4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS8Q8N3P4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS8Q8N3P4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 AC005089.1-201ENST00000619486 2241 ntBASIC22.39■■□□□ 1.17
VPS8Q8N3P4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC22.39■■□□□ 1.17
VPS8Q8N3P4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 RN7SL181P-201ENST00000462921 277 ntBASIC22.39■■□□□ 1.17
VPS8Q8N3P4 RN7SL81P-201ENST00000493781 261 ntBASIC22.39■■□□□ 1.17
VPS8Q8N3P4 CHCHD2P2-201ENST00000503744 321 ntBASIC22.39■■□□□ 1.17
VPS8Q8N3P4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC22.39■■□□□ 1.17
VPS8Q8N3P4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 AL591122.2-201ENST00000624125 1853 ntBASIC22.38■■□□□ 1.17
VPS8Q8N3P4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 AC007686.3-201ENST00000619017 3487 ntBASIC22.38■■□□□ 1.17
VPS8Q8N3P4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 AL627231.1-201ENST00000394467 1125 ntBASIC22.38■■□□□ 1.17
VPS8Q8N3P4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS8Q8N3P4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms