Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 NCLP1-201ENST00000445357 1963 ntBASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 ZNF259P1-201ENST00000407656 1365 ntBASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AC011840.2-201ENST00000563063 1520 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CSPG4P13-202ENST00000567704 4801 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AC136604.1-202ENST00000425471 771 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 HNRNPDP1-201ENST00000439535 754 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 VN2R19P-201ENST00000442399 1052 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AC098859.1-201ENST00000502915 1238 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AC116407.3-201ENST00000623905 1129 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 HERC2P9-206ENST00000529624 5187 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CYP4F24P-201ENST00000586049 1580 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 AL136982.4-201ENST00000437689 1740 ntBASIC11.4□□□□□ -0.58
KCNIP4Q6PIL6 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 AC011498.7-201ENST00000624986 2027 ntBASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 Z98257.2-202ENST00000641138 1548 ntBASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
KCNIP4Q6PIL6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KCNIP4Q6PIL6 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.39□□□□□ -0.59
KCNIP4Q6PIL6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms