Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.72□□□□□ -0.53
FAM78BQ5VT40 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 TCAM1P-207ENST00000485295 1537 ntBASIC11.71□□□□□ -0.53
FAM78BQ5VT40 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 AL080243.2-201ENST00000418783 582 ntBASIC11.71□□□□□ -0.53
FAM78BQ5VT40 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.71□□□□□ -0.53
FAM78BQ5VT40 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
FAM78BQ5VT40 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.71□□□□□ -0.54
FAM78BQ5VT40 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
FAM78BQ5VT40 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms