Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CBWD3Q5JTY5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 OR8S1-201ENST00000310194 1080 ntBASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 RPSAP36-202ENST00000494591 1261 ntBASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 AC090643.2-201ENST00000623442 2029 ntBASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 KRT8P24-201ENST00000560290 1559 ntBASIC15.75■□□□□ 0.11
CBWD3Q5JTY5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 AC015818.8-201ENST00000587907 1519 ntBASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 HSPB1P2-201ENST00000448722 546 ntBASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 AC010328.2-201ENST00000597698 1111 ntBASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 AL157996.1-201ENST00000624684 2299 ntBASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.74■□□□□ 0.11
CBWD3Q5JTY5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CBWD3Q5JTY5 REXO1L6P-201ENST00000603433 1515 ntBASIC15.73■□□□□ 0.11
CBWD3Q5JTY5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBWD3Q5JTY5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBWD3Q5JTY5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.73■□□□□ 0.11
CBWD3Q5JTY5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms