Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC026740.1-201ENST00000607068 791 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AL136301.1-201ENST00000615830 422 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC100757.4-201ENST00000626934 759 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC004923.1-202ENST00000642106 209 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC008132.1-202ENST00000342005 1389 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 REXO1L4P-201ENST00000605109 1937 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 RN7SKP175-201ENST00000408472 289 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ACTG1P2-201ENST00000415776 1125 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ACTG1P11-201ENST00000425411 1125 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 FGFR3P5-201ENST00000564496 886 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 MIR4783-201ENST00000580343 82 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 RN7SL574P-201ENST00000581512 297 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 MIR4706-201ENST00000582134 82 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 RN7SL163P-201ENST00000583100 276 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 AL162426.1-201ENST00000624141 743 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 INE2-201ENST00000630399 1874 ntBASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC144BQ3MJ40 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 FXNP2-201ENST00000411625 547 ntBASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms