Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AL391069.4-201ENST00000609583 481 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
SSBP1Q04837 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSBP1Q04837 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP1Q04837 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 PCDHB18P-202ENST00000526308 3197 ntBASIC12.4□□□□□ -0.42
SSBP1Q04837 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP1Q04837 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP1Q04837 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP1Q04837 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP1Q04837 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
SSBP1Q04837 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP1Q04837 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP1Q04837 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
SSBP1Q04837 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP1Q04837 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 AL365181.3-201ENST00000605886 3222 ntBASIC12.39□□□□□ -0.43
SSBP1Q04837 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
SSBP1Q04837 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP1Q04837 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP1Q04837 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP1Q04837 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 MTDHP5-201ENST00000598980 586 ntBASIC12.39□□□□□ -0.43
SSBP1Q04837 AC104506.1-201ENST00000609247 429 ntBASIC12.39□□□□□ -0.43
SSBP1Q04837 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP1Q04837 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SSBP1Q04837 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP1Q04837 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP1Q04837 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms