Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.04□□□□□ -0.32
EFNB1P98172 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNB1P98172 DFFBP1-201ENST00000433250 979 ntBASIC13.04□□□□□ -0.32
EFNB1P98172 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNB1P98172 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.04□□□□□ -0.32
EFNB1P98172 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNB1P98172 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
EFNB1P98172 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
EFNB1P98172 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNB1P98172 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNB1P98172 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
EFNB1P98172 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 AL391825.1-201ENST00000457671 1364 ntBASIC13.04□□□□□ -0.32
EFNB1P98172 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNB1P98172 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNB1P98172 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EFNB1P98172 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
EFNB1P98172 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.03□□□□□ -0.32
EFNB1P98172 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNB1P98172 AC106820.3-201ENST00000561653 397 ntBASIC13.03□□□□□ -0.32
EFNB1P98172 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNB1P98172 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.03□□□□□ -0.32
EFNB1P98172 CHCHD2P3-201ENST00000603038 451 ntBASIC13.03□□□□□ -0.32
EFNB1P98172 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 AL691403.2-201ENST00000618460 490 ntBASIC13.03□□□□□ -0.32
EFNB1P98172 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
EFNB1P98172 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
EFNB1P98172 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNB1P98172 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNB1P98172 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNB1P98172 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.02□□□□□ -0.32
EFNB1P98172 MSTO2P-201ENST00000314835 1709 ntBASIC13.02□□□□□ -0.32
EFNB1P98172 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.02□□□□□ -0.32
EFNB1P98172 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
EFNB1P98172 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
EFNB1P98172 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
EFNB1P98172 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
EFNB1P98172 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
EFNB1P98172 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
EFNB1P98172 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms