Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VBP1P61758 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VBP1P61758 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 TUBB8P4-201ENST00000511806 1324 ntBASIC13.15□□□□□ -0.3
VBP1P61758 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 AL445250.1-201ENST00000641671 2259 ntBASIC13.15□□□□□ -0.3
VBP1P61758 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 AL355306.1-201ENST00000415580 579 ntBASIC13.15□□□□□ -0.3
VBP1P61758 AL671277.1-201ENST00000429656 993 ntBASIC13.15□□□□□ -0.3
VBP1P61758 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.15□□□□□ -0.3
VBP1P61758 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.15□□□□□ -0.3
VBP1P61758 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 BANF1P1-201ENST00000553684 263 ntBASIC13.15□□□□□ -0.3
VBP1P61758 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 AC106730.1-201ENST00000566722 1090 ntBASIC13.15□□□□□ -0.3
VBP1P61758 AC105021.1-202ENST00000570572 669 ntBASIC13.15□□□□□ -0.3
VBP1P61758 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
VBP1P61758 AC092364.2-202ENST00000597012 1073 ntBASIC13.15□□□□□ -0.3
VBP1P61758 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
VBP1P61758 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VBP1P61758 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.15□□□□□ -0.3
VBP1P61758 AL355102.3-201ENST00000554299 1678 ntBASIC13.15□□□□□ -0.31
VBP1P61758 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.15□□□□□ -0.31
VBP1P61758 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.15□□□□□ -0.31
VBP1P61758 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.14□□□□□ -0.31
VBP1P61758 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 AC060814.4-201ENST00000594169 2163 ntBASIC13.14□□□□□ -0.31
VBP1P61758 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 AP003969.2-201ENST00000623739 2275 ntBASIC13.14□□□□□ -0.31
VBP1P61758 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
VBP1P61758 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 AC015922.1-201ENST00000421102 1152 ntBASIC13.14□□□□□ -0.31
VBP1P61758 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.14□□□□□ -0.31
VBP1P61758 RARRES2P9-201ENST00000565168 469 ntBASIC13.14□□□□□ -0.31
VBP1P61758 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.14□□□□□ -0.31
VBP1P61758 PRELID1P1-202ENST00000567272 903 ntBASIC13.14□□□□□ -0.31
VBP1P61758 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
VBP1P61758 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 AC107375.1-201ENST00000564464 2231 ntBASIC13.14□□□□□ -0.31
VBP1P61758 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.14□□□□□ -0.31
VBP1P61758 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
VBP1P61758 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VBP1P61758 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VBP1P61758 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.14□□□□□ -0.31
VBP1P61758 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms