Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 AC131206.1-201ENST00000538078 1211 ntBASIC14.01□□□□□ -0.17
CLDN6P56747 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.01□□□□□ -0.17
CLDN6P56747 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 BX088702.1-201ENST00000610784 235 ntBASIC14.01□□□□□ -0.17
CLDN6P56747 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN6P56747 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN6P56747 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN6P56747 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14□□□□□ -0.17
CLDN6P56747 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLDN6P56747 KRT8P31-201ENST00000504812 1408 ntBASIC14□□□□□ -0.17
CLDN6P56747 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CLDN6P56747 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14□□□□□ -0.17
CLDN6P56747 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 AL357563.1-201ENST00000404728 395 ntBASIC14□□□□□ -0.17
CLDN6P56747 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 DUX4L50-201ENST00000455245 715 ntBASIC14□□□□□ -0.17
CLDN6P56747 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLDN6P56747 LINC00634-202ENST00000505157 222 ntBASIC14□□□□□ -0.17
CLDN6P56747 ALG3P1-201ENST00000508806 1114 ntBASIC14□□□□□ -0.17
CLDN6P56747 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 ALG1L6P-201ENST00000515248 758 ntBASIC14□□□□□ -0.17
CLDN6P56747 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 MIR3188-201ENST00000583494 85 ntBASIC14□□□□□ -0.17
CLDN6P56747 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CLDN6P56747 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 AP001184.1-201ENST00000637936 376 ntBASIC14□□□□□ -0.17
CLDN6P56747 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDN6P56747 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN6P56747 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN6P56747 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms