Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 AC136759.1-202ENST00000530858 2194 ntBASIC13.67□□□□□ -0.22
PER3P56645 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.67□□□□□ -0.22
PER3P56645 CYP46A4P-201ENST00000414953 267 ntBASIC13.67□□□□□ -0.22
PER3P56645 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.67□□□□□ -0.22
PER3P56645 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 AC011742.3-201ENST00000439053 820 ntBASIC13.67□□□□□ -0.22
PER3P56645 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.67□□□□□ -0.22
PER3P56645 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 IMP3P2-201ENST00000489760 475 ntBASIC13.67□□□□□ -0.22
PER3P56645 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.67□□□□□ -0.22
PER3P56645 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.67□□□□□ -0.22
PER3P56645 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.67□□□□□ -0.22
PER3P56645 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.67□□□□□ -0.22
PER3P56645 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 AC100757.4-201ENST00000626934 759 ntBASIC13.67□□□□□ -0.22
PER3P56645 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.67□□□□□ -0.22
PER3P56645 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 TCAF1P1-201ENST00000414990 2232 ntBASIC13.67□□□□□ -0.22
PER3P56645 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PER3P56645 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.66□□□□□ -0.22
PER3P56645 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.66□□□□□ -0.22
PER3P56645 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 AC138969.2-201ENST00000532739 9932 ntBASIC13.66□□□□□ -0.22
PER3P56645 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
PER3P56645 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 RNU1-114P-201ENST00000365297 166 ntBASIC13.66□□□□□ -0.22
PER3P56645 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 KLF2P2-201ENST00000416807 1039 ntBASIC13.66□□□□□ -0.22
PER3P56645 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.66□□□□□ -0.22
PER3P56645 FAM8A4P-201ENST00000435433 1213 ntBASIC13.66□□□□□ -0.22
PER3P56645 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PER3P56645 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.66□□□□□ -0.22
PER3P56645 RN7SL11P-201ENST00000471305 293 ntBASIC13.66□□□□□ -0.22
PER3P56645 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
PER3P56645 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PER3P56645 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.66□□□□□ -0.22
PER3P56645 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.66□□□□□ -0.22
PER3P56645 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.66□□□□□ -0.22
PER3P56645 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 AL023775.1-201ENST00000454907 1746 ntBASIC13.66□□□□□ -0.22
PER3P56645 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PER3P56645 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.66□□□□□ -0.22
PER3P56645 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PER3P56645 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PER3P56645 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms