Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM23P36406 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 AL365209.1-201ENST00000624418 6473 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 LINC01165-201ENST00000445190 1623 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.35□□□□□ -0.11
TRIM23P36406 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 TSPY25P-201ENST00000429463 745 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM23P36406 IMP3P2-201ENST00000489760 475 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM23P36406 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.35□□□□□ -0.11
TRIM23P36406 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.35□□□□□ -0.11
TRIM23P36406 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM23P36406 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM23P36406 AC020922.3-201ENST00000595064 547 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 AC079336.7-201ENST00000623428 1078 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 KRT8P19-201ENST00000551916 1455 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM23P36406 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 AC113367.3-201ENST00000508316 1912 ntBASIC14.35□□□□□ -0.11
TRIM23P36406 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRIM23P36406 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM23P36406 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 AC073150.1-201ENST00000450406 1084 ntBASIC14.34□□□□□ -0.11
TRIM23P36406 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM23P36406 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM23P36406 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.34□□□□□ -0.11
TRIM23P36406 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 AC242376.1-201ENST00000559033 726 ntBASIC14.34□□□□□ -0.11
TRIM23P36406 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM23P36406 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM23P36406 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM23P36406 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRIM23P36406 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms