Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 OR10N1P-201ENST00000392758 869 ntBASIC17.74■□□□□ 0.43
TM4SF1P30408 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
TM4SF1P30408 AC092570.1-201ENST00000414446 469 ntBASIC17.74■□□□□ 0.43
TM4SF1P30408 FAM21EP-201ENST00000417804 985 ntBASIC17.74■□□□□ 0.43
TM4SF1P30408 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 RPL3P5-201ENST00000441645 1232 ntBASIC17.74■□□□□ 0.43
TM4SF1P30408 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 AC087203.1-201ENST00000532111 1181 ntBASIC17.74■□□□□ 0.43
TM4SF1P30408 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.74■□□□□ 0.43
TM4SF1P30408 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF1P30408 KRT8P43-201ENST00000406052 1458 ntBASIC17.74■□□□□ 0.43
TM4SF1P30408 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TM4SF1P30408 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF1P30408 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 GEMIN8P4-201ENST00000380526 729 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 AC073210.1-201ENST00000414799 232 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.73■□□□□ 0.43
TM4SF1P30408 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.73■□□□□ 0.43
TM4SF1P30408 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.73■□□□□ 0.43
TM4SF1P30408 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.73■□□□□ 0.43
TM4SF1P30408 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.73■□□□□ 0.43
TM4SF1P30408 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.73■□□□□ 0.43
TM4SF1P30408 BCRP4-201ENST00000506079 804 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 KNOP1P1-201ENST00000542108 989 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 AC073869.4-201ENST00000620841 800 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 AC007952.5-201ENST00000572818 1486 ntBASIC17.73■□□□□ 0.43
TM4SF1P30408 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TM4SF1P30408 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF1P30408 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF1P30408 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TM4SF1P30408 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
TM4SF1P30408 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 OR6D1P-203ENST00000641209 4860 ntBASIC17.72■□□□□ 0.43
TM4SF1P30408 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TM4SF1P30408 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms