Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP11P24347 DPM3-202ENST00000368399 517 ntBASIC13.91□□□□□ -0.18
MMP11P24347 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.91□□□□□ -0.18
MMP11P24347 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 RNMTL1P1-201ENST00000454103 560 ntBASIC13.91□□□□□ -0.18
MMP11P24347 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP11P24347 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP11P24347 AC005324.6-201ENST00000587972 613 ntBASIC13.91□□□□□ -0.18
MMP11P24347 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.91□□□□□ -0.18
MMP11P24347 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 AC004923.1-202ENST00000642106 209 ntBASIC13.91□□□□□ -0.18
MMP11P24347 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 AC152010.1-201ENST00000415779 2006 ntBASIC13.91□□□□□ -0.18
MMP11P24347 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 SALL4P5-201ENST00000419001 1760 ntBASIC13.91□□□□□ -0.18
MMP11P24347 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MMP11P24347 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
MMP11P24347 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.9□□□□□ -0.18
MMP11P24347 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.9□□□□□ -0.18
MMP11P24347 AC013355.1-201ENST00000562625 723 ntBASIC13.9□□□□□ -0.18
MMP11P24347 MIR4783-201ENST00000580343 82 ntBASIC13.9□□□□□ -0.18
MMP11P24347 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.9□□□□□ -0.18
MMP11P24347 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
MMP11P24347 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.9□□□□□ -0.18
MMP11P24347 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
MMP11P24347 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MMP11P24347 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP11P24347 AC004899.1-201ENST00000424687 1714 ntBASIC13.9□□□□□ -0.18
MMP11P24347 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.9□□□□□ -0.19
MMP11P24347 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms