Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL1P22362 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL1P22362 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL1P22362 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL1P22362 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL1P22362 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL1P22362 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 AL365209.1-201ENST00000624418 6473 ntBASIC12.56□□□□□ -0.4
CCL1P22362 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCL1P22362 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.56□□□□□ -0.4
CCL1P22362 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 CHMP1AP1-201ENST00000445563 662 ntBASIC12.56□□□□□ -0.4
CCL1P22362 AL355994.2-201ENST00000447882 704 ntBASIC12.56□□□□□ -0.4
CCL1P22362 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CCL1P22362 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 KRT18P8-201ENST00000581937 1246 ntBASIC12.56□□□□□ -0.4
CCL1P22362 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.56□□□□□ -0.4
CCL1P22362 AL591163.1-201ENST00000641757 987 ntBASIC12.56□□□□□ -0.4
CCL1P22362 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 SHC1P1-201ENST00000425230 1745 ntBASIC12.56□□□□□ -0.4
CCL1P22362 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL1P22362 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CCL1P22362 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 AC072061.1-201ENST00000569710 2234 ntBASIC12.56□□□□□ -0.4
CCL1P22362 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL1P22362 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CCL1P22362 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 FAM90A12P-201ENST00000519497 2375 ntBASIC12.55□□□□□ -0.4
CCL1P22362 FAM90A24P-201ENST00000520792 2369 ntBASIC12.55□□□□□ -0.4
CCL1P22362 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL1P22362 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL1P22362 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL1P22362 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL1P22362 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL1P22362 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL1P22362 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.55□□□□□ -0.4
CCL1P22362 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.55□□□□□ -0.4
CCL1P22362 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.55□□□□□ -0.4
CCL1P22362 AC027307.3-201ENST00000594262 1100 ntBASIC12.55□□□□□ -0.4
CCL1P22362 BTNL10-201ENST00000595971 695 ntBASIC12.55□□□□□ -0.4
CCL1P22362 AC244669.2-201ENST00000612320 853 ntBASIC12.55□□□□□ -0.4
CCL1P22362 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 AC025048.6-201ENST00000634326 1161 ntBASIC12.55□□□□□ -0.4
CCL1P22362 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL1P22362 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms