Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATF3P18847 AL137244.1-201ENST00000422931 865 ntBASIC19.66■□□□□ 0.74
ATF3P18847 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC19.66■□□□□ 0.74
ATF3P18847 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.66■□□□□ 0.74
ATF3P18847 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 AC091304.3-201ENST00000566500 716 ntBASIC19.66■□□□□ 0.74
ATF3P18847 NEK4P3-201ENST00000604859 544 ntBASIC19.66■□□□□ 0.74
ATF3P18847 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19.66■□□□□ 0.74
ATF3P18847 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.66■□□□□ 0.74
ATF3P18847 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19.66■□□□□ 0.74
ATF3P18847 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
ATF3P18847 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.66■□□□□ 0.74
ATF3P18847 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.66■□□□□ 0.74
ATF3P18847 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.65■□□□□ 0.74
ATF3P18847 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.65■□□□□ 0.74
ATF3P18847 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATF3P18847 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ATF3P18847 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC19.65■□□□□ 0.74
ATF3P18847 AC025594.1-201ENST00000469533 543 ntBASIC19.65■□□□□ 0.74
ATF3P18847 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC19.65■□□□□ 0.74
ATF3P18847 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 AC006116.2-201ENST00000589958 988 ntBASIC19.65■□□□□ 0.74
ATF3P18847 AC080013.5-201ENST00000607044 679 ntBASIC19.65■□□□□ 0.74
ATF3P18847 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19.65■□□□□ 0.74
ATF3P18847 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.65■□□□□ 0.74
ATF3P18847 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATF3P18847 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATF3P18847 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATF3P18847 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 CCT8L1P-201ENST00000465400 1674 ntBASIC19.65■□□□□ 0.74
ATF3P18847 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATF3P18847 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATF3P18847 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.64■□□□□ 0.74
ATF3P18847 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATF3P18847 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATF3P18847 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATF3P18847 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.64■□□□□ 0.73
ATF3P18847 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATF3P18847 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATF3P18847 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ATF3P18847 SIRPB3P-201ENST00000340424 1216 ntBASIC19.64■□□□□ 0.73
ATF3P18847 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 ABCD1P4-201ENST00000399687 604 ntBASIC19.64■□□□□ 0.73
ATF3P18847 AC073210.1-201ENST00000414799 232 ntBASIC19.64■□□□□ 0.73
ATF3P18847 AC136604.1-202ENST00000425471 771 ntBASIC19.64■□□□□ 0.73
ATF3P18847 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 SLC25A15P3-201ENST00000505530 290 ntBASIC19.64■□□□□ 0.73
ATF3P18847 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC19.64■□□□□ 0.73
ATF3P18847 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.64■□□□□ 0.73
ATF3P18847 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC19.64■□□□□ 0.73
ATF3P18847 AC120498.7-201ENST00000562876 330 ntBASIC19.64■□□□□ 0.73
ATF3P18847 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.64■□□□□ 0.73
ATF3P18847 AC090510.3-201ENST00000615831 821 ntBASIC19.64■□□□□ 0.73
ATF3P18847 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.64■□□□□ 0.73
ATF3P18847 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.64■□□□□ 0.73
ATF3P18847 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF3P18847 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
ATF3P18847 AC068587.6-202ENST00000641839 5619 ntBASIC19.63■□□□□ 0.73
ATF3P18847 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms