Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 MIR33B-201ENST00000385104 96 ntBASIC16.76■□□□□ 0.27
BMP3P12645 AL583805.1-201ENST00000391389 531 ntBASIC16.76■□□□□ 0.27
BMP3P12645 AC026316.1-201ENST00000398900 414 ntBASIC16.76■□□□□ 0.27
BMP3P12645 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 AP000358.1-201ENST00000456260 156 ntBASIC16.76■□□□□ 0.27
BMP3P12645 RN7SL277P-201ENST00000481521 288 ntBASIC16.76■□□□□ 0.27
BMP3P12645 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.76■□□□□ 0.27
BMP3P12645 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.76■□□□□ 0.27
BMP3P12645 AC140658.4-201ENST00000561990 352 ntBASIC16.76■□□□□ 0.27
BMP3P12645 AC093752.3-201ENST00000567343 901 ntBASIC16.76■□□□□ 0.27
BMP3P12645 MIR4706-201ENST00000582134 82 ntBASIC16.76■□□□□ 0.27
BMP3P12645 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 AC103691.2-201ENST00000618824 433 ntBASIC16.76■□□□□ 0.27
BMP3P12645 AC051619.9-201ENST00000623237 597 ntBASIC16.76■□□□□ 0.27
BMP3P12645 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 AC006480.2-201ENST00000609770 1337 ntBASIC16.75■□□□□ 0.27
BMP3P12645 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BMP3P12645 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 FGFR3P1-201ENST00000449999 601 ntBASIC16.75■□□□□ 0.27
BMP3P12645 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.75■□□□□ 0.27
BMP3P12645 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.75■□□□□ 0.27
BMP3P12645 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
BMP3P12645 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
BMP3P12645 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.75■□□□□ 0.27
BMP3P12645 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.75■□□□□ 0.27
BMP3P12645 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BMP3P12645 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BMP3P12645 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.75■□□□□ 0.27
BMP3P12645 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BMP3P12645 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.74■□□□□ 0.27
BMP3P12645 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 KRT8P31-201ENST00000504812 1408 ntBASIC16.74■□□□□ 0.27
BMP3P12645 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms