Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 UGT1A2P-201ENST00000454886 866 ntBASIC13.05□□□□□ -0.32
APOC1P02654 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.05□□□□□ -0.32
APOC1P02654 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 LINC02560-201ENST00000596379 459 ntBASIC13.05□□□□□ -0.32
APOC1P02654 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 AL096865.1-201ENST00000606796 927 ntBASIC13.05□□□□□ -0.32
APOC1P02654 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 AC005252.2-201ENST00000624630 1141 ntBASIC13.05□□□□□ -0.32
APOC1P02654 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
APOC1P02654 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOC1P02654 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 EIF3FP3-201ENST00000434851 1086 ntBASIC13.04□□□□□ -0.32
APOC1P02654 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 ELK1P1-201ENST00000485699 580 ntBASIC13.04□□□□□ -0.32
APOC1P02654 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.04□□□□□ -0.32
APOC1P02654 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.04□□□□□ -0.32
APOC1P02654 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC1P02654 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 AC011700.1-201ENST00000610409 2627 ntBASIC13.04□□□□□ -0.32
APOC1P02654 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC1P02654 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC1P02654 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOC1P02654 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
APOC1P02654 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms