Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
KRT6AP02538 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6AP02538 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6AP02538 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6AP02538 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6AP02538 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6AP02538 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 AC132938.4-201ENST00000623835 848 ntBASIC14.24□□□□□ -0.13
KRT6AP02538 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
KRT6AP02538 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.24□□□□□ -0.13
KRT6AP02538 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KRT6AP02538 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KRT6AP02538 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KRT6AP02538 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 AC098614.1-201ENST00000368528 745 ntBASIC14.23□□□□□ -0.13
KRT6AP02538 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 PUDPP3-201ENST00000445368 636 ntBASIC14.23□□□□□ -0.13
KRT6AP02538 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.23□□□□□ -0.13
KRT6AP02538 CRB3P1-201ENST00000449338 276 ntBASIC14.23□□□□□ -0.13
KRT6AP02538 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 AC011495.1-201ENST00000498085 584 ntBASIC14.23□□□□□ -0.13
KRT6AP02538 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.23□□□□□ -0.13
KRT6AP02538 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
KRT6AP02538 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.23□□□□□ -0.13
KRT6AP02538 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.23□□□□□ -0.13
KRT6AP02538 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KRT6AP02538 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms