Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TRBV12-3P01733 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRBV12-3P01733 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.32□□□□□ -0.6
TRBV12-3P01733 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.32□□□□□ -0.6
TRBV12-3P01733 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AL591846.1-201ENST00000451736 433 ntBASIC11.32□□□□□ -0.6
TRBV12-3P01733 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AC104982.3-201ENST00000581995 514 ntBASIC11.32□□□□□ -0.6
TRBV12-3P01733 RN7SL219P-201ENST00000582872 296 ntBASIC11.32□□□□□ -0.6
TRBV12-3P01733 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 MIR6720-201ENST00000611664 98 ntBASIC11.32□□□□□ -0.6
TRBV12-3P01733 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRBV12-3P01733 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.32□□□□□ -0.6
TRBV12-3P01733 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 RN7SL832P-201ENST00000607781 1756 ntBASIC11.31□□□□□ -0.6
TRBV12-3P01733 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRBV12-3P01733 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRBV12-3P01733 AC018735.1-201ENST00000437208 1502 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms