Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
NDUFS3O75489 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NDUFS3O75489 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC012617.1-204ENST00000586340 2305 ntBASIC14.63□□□□□ -0.07
NDUFS3O75489 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC112492.5-201ENST00000421897 457 ntBASIC14.63□□□□□ -0.07
NDUFS3O75489 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.63□□□□□ -0.07
NDUFS3O75489 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 GAPDHP21-201ENST00000450301 1010 ntBASIC14.63□□□□□ -0.07
NDUFS3O75489 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AP000812.2-201ENST00000538934 718 ntBASIC14.63□□□□□ -0.07
NDUFS3O75489 KRT17P8-201ENST00000540749 863 ntBASIC14.63□□□□□ -0.07
NDUFS3O75489 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.63□□□□□ -0.07
NDUFS3O75489 ZACNP1-201ENST00000612259 710 ntBASIC14.63□□□□□ -0.07
NDUFS3O75489 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NDUFS3O75489 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.63□□□□□ -0.07
NDUFS3O75489 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFS3O75489 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFS3O75489 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 AL035414.1-201ENST00000451327 857 ntBASIC14.62□□□□□ -0.07
NDUFS3O75489 KLF2P4-201ENST00000451959 1225 ntBASIC14.62□□□□□ -0.07
NDUFS3O75489 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.62□□□□□ -0.07
NDUFS3O75489 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 SORD2P-201ENST00000558556 1069 ntBASIC14.62□□□□□ -0.07
NDUFS3O75489 AC106886.1-201ENST00000568660 600 ntBASIC14.62□□□□□ -0.07
NDUFS3O75489 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.62□□□□□ -0.07
NDUFS3O75489 PPY2P-201ENST00000582808 702 ntBASIC14.62□□□□□ -0.07
NDUFS3O75489 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 AC011498.7-201ENST00000624986 2027 ntBASIC14.62□□□□□ -0.07
NDUFS3O75489 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.62□□□□□ -0.07
NDUFS3O75489 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFS3O75489 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.62□□□□□ -0.07
NDUFS3O75489 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFS3O75489 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFS3O75489 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms