Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC15.09■□□□□ 0.01
TNRC18O15417 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.09■□□□□ 0.01
TNRC18O15417 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.09■□□□□ 0.01
TNRC18O15417 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC15.09■□□□□ 0.01
TNRC18O15417 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TNRC18O15417 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 ALDOAP2-201ENST00000398050 1076 ntBASIC15.08■□□□□ 0
TNRC18O15417 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC15.08■□□□□ 0
TNRC18O15417 RNA5SP407-201ENST00000410275 110 ntBASIC15.08■□□□□ 0
TNRC18O15417 EEF1GP3-201ENST00000421044 1288 ntBASIC15.08■□□□□ 0
TNRC18O15417 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 AC087163.1-201ENST00000430089 381 ntBASIC15.08■□□□□ 0
TNRC18O15417 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC15.08■□□□□ 0
TNRC18O15417 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC15.08■□□□□ 0
TNRC18O15417 AL031673.1-201ENST00000611460 466 ntBASIC15.08■□□□□ 0
TNRC18O15417 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TNRC18O15417 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 AC232323.1-201ENST00000540724 2099 ntBASIC15.08■□□□□ 0
TNRC18O15417 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.08■□□□□ 0
TNRC18O15417 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC15.08■□□□□ 0
TNRC18O15417 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 RN7SL750P-201ENST00000582814 238 ntBASIC15.08■□□□□ 0
TNRC18O15417 AC005336.1-201ENST00000585431 1243 ntBASIC15.08■□□□□ 0
TNRC18O15417 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.08■□□□□ 0
TNRC18O15417 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.08■□□□□ 0
TNRC18O15417 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNRC18O15417 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 NOC2LP2-201ENST00000407594 1944 ntBASIC15.07■□□□□ 0
TNRC18O15417 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TNRC18O15417 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC15.07■□□□□ 0
TNRC18O15417 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC15.07■□□□□ 0
TNRC18O15417 YBX1P3-201ENST00000468366 909 ntBASIC15.07■□□□□ 0
TNRC18O15417 AC104212.2-201ENST00000478813 628 ntBASIC15.07■□□□□ 0
TNRC18O15417 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC15.07■□□□□ 0
TNRC18O15417 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC15.07■□□□□ 0
TNRC18O15417 KRT18P8-201ENST00000581937 1246 ntBASIC15.07■□□□□ 0
TNRC18O15417 snoZ6.3-201ENST00000583496 76 ntBASIC15.07■□□□□ 0
TNRC18O15417 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 USP8-219ENST00000625664 1568 ntTSL 5 BASIC15.07■□□□□ 0
TNRC18O15417 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.07■□□□□ 0
TNRC18O15417 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 AC011477.7-201ENST00000617163 1440 ntBASIC15.07■□□□□ 0
TNRC18O15417 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.07■□□□□ 0
TNRC18O15417 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 AC105443.1-201ENST00000433754 712 ntBASIC15.07■□□□□ 0
TNRC18O15417 NDUFB2P1-201ENST00000506966 295 ntBASIC15.07■□□□□ 0
TNRC18O15417 MIR4689-201ENST00000582517 70 ntBASIC15.07■□□□□ 0
TNRC18O15417 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.07■□□□□ 0
TNRC18O15417 MIR7847-201ENST00000610912 103 ntBASIC15.07■□□□□ 0
TNRC18O15417 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.07■□□□□ 0
TNRC18O15417 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.07■□□□□ 0
TNRC18O15417 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.07■□□□□ 0
TNRC18O15417 CHIAP2-204ENST00000532686 1449 ntBASIC15.07■□□□□ 0
TNRC18O15417 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNRC18O15417 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TNRC18O15417 LINC00115-201ENST00000473798 1317 ntBASIC15.06■□□□□ 0
TNRC18O15417 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC15.06■□□□□ 0
TNRC18O15417 RN7SL229P-201ENST00000495651 299 ntBASIC15.06■□□□□ 0
TNRC18O15417 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC15.06■□□□□ 0
TNRC18O15417 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC15.06■□□□□ 0
TNRC18O15417 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.06■□□□□ 0
TNRC18O15417 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms