Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC015688.4-201ENST00000580780 1647 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 RPL17P11-201ENST00000417593 544 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP2A1O14983 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP2A1O14983 NPM1P43-201ENST00000558669 786 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 AC093752.3-201ENST00000567343 901 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP2A1O14983 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC005632.3-201ENST00000605544 308 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 AC092171.5-201ENST00000608012 942 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC011491.1-203ENST00000637688 543 ntBASIC16.68■□□□□ 0.26
ATP2A1O14983 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATP2A1O14983 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2A1O14983 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2A1O14983 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ATP2A1O14983 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATP2A1O14983 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATP2A1O14983 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP2A1O14983 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP2A1O14983 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP2A1O14983 AC078991.1-201ENST00000437297 610 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 AC104784.1-201ENST00000473096 294 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 RN7SL530P-201ENST00000485097 298 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP2A1O14983 DNM1P30-201ENST00000563586 452 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 AL031713.1-201ENST00000564813 661 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 AC087045.2-201ENST00000606279 1003 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATP2A1O14983 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2A1O14983 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A1O14983 AC074138.1-201ENST00000611182 1303 ntBASIC16.67■□□□□ 0.26
ATP2A1O14983 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A1O14983 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A1O14983 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms