Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CCDC188H7C350 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC188H7C350 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.25■□□□□ 0.03
CCDC188H7C350 AC004790.1-201ENST00000612686 536 ntBASIC15.25■□□□□ 0.03
CCDC188H7C350 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC188H7C350 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC188H7C350 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC188H7C350 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC188H7C350 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC188H7C350 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC188H7C350 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC188H7C350 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC188H7C350 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC188H7C350 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC188H7C350 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC188H7C350 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC188H7C350 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC188H7C350 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC188H7C350 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CCDC188H7C350 SOCS2P1-201ENST00000417727 557 ntBASIC15.24■□□□□ 0.03
CCDC188H7C350 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC188H7C350 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC188H7C350 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC188H7C350 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CCDC188H7C350 AC135782.3-201ENST00000562782 2105 ntBASIC15.24■□□□□ 0.03
CCDC188H7C350 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC188H7C350 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC188H7C350 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC188H7C350 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC188H7C350 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC188H7C350 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC188H7C350 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC188H7C350 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCDC188H7C350 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC188H7C350 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC188H7C350 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC188H7C350 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 USP17L6P-201ENST00000382470 1197 ntBASIC15.23■□□□□ 0.03
CCDC188H7C350 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC188H7C350 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC188H7C350 DNAJB3-202ENST00000449667 1266 ntBASIC15.23■□□□□ 0.03
CCDC188H7C350 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
CCDC188H7C350 AC004890.2-204ENST00000481968 304 ntBASIC15.23■□□□□ 0.03
CCDC188H7C350 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC188H7C350 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC188H7C350 AC027237.1-201ENST00000560942 655 ntBASIC15.23■□□□□ 0.03
CCDC188H7C350 BAP1-211ENST00000615113 489 ntBASIC15.23■□□□□ 0.03
CCDC188H7C350 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC188H7C350 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC188H7C350 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC188H7C350 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC188H7C350 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC188H7C350 AC131212.3-201ENST00000624087 4219 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms