Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 FAM90A12P-201ENST00000519497 2375 ntBASIC15.24■□□□□ 0.03
SRRM3A6NNA2 FAM90A24P-201ENST00000520792 2369 ntBASIC15.24■□□□□ 0.03
SRRM3A6NNA2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 DUX4L45-201ENST00000566406 1057 ntBASIC15.24■□□□□ 0.03
SRRM3A6NNA2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 AC133539.2-201ENST00000604757 467 ntBASIC15.24■□□□□ 0.03
SRRM3A6NNA2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 KRT8P19-201ENST00000551916 1455 ntBASIC15.24■□□□□ 0.03
SRRM3A6NNA2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRRM3A6NNA2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.23■□□□□ 0.03
SRRM3A6NNA2 FAM86HP-204ENST00000513466 959 ntBASIC15.23■□□□□ 0.03
SRRM3A6NNA2 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRRM3A6NNA2 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms