Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 METTL21AP1-201ENST00000438852 635 ntBASIC15.99■□□□□ 0.15
CCDC66A2RUB6 AC114501.2-201ENST00000439631 535 ntBASIC15.99■□□□□ 0.15
CCDC66A2RUB6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 AL158211.3-201ENST00000607385 239 ntBASIC15.99■□□□□ 0.15
CCDC66A2RUB6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 GAPDHP40-201ENST00000505218 1006 ntBASIC15.98■□□□□ 0.15
CCDC66A2RUB6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 AL158212.4-201ENST00000624062 1286 ntBASIC15.98■□□□□ 0.15
CCDC66A2RUB6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.98■□□□□ 0.15
CCDC66A2RUB6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC66A2RUB6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 AC092580.3-201ENST00000430932 139 ntBASIC15.97■□□□□ 0.15
CCDC66A2RUB6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms