Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AC126335.2-201ENST00000623362 4637 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 RPSAP43-201ENST00000402237 625 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AL691403.2-201ENST00000618460 490 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AC064801.2-201ENST00000625052 1303 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AL359845.1-201ENST00000458202 1648 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AC004899.2-201ENST00000622993 3860 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 AC093813.1-201ENST00000605066 256 ntBASIC12.75□□□□□ -0.37
SHISA3A0PJX4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PCDHB19P-202ENST00000625133 2914 ntBASIC12.75□□□□□ -0.37
SHISA3A0PJX4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA3A0PJX4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms