Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PPT1-215ENST00000641471 2368 ntBASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ST13P19-201ENST00000442505 1124 ntBASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ALG1L13P-202ENST00000519320 584 ntBASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 AC139712.1-201ENST00000378256 1875 ntBASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 LINC01815-202ENST00000641468 1409 ntBASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AC073869.2-201ENST00000417338 1026 ntBASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AC004837.1-201ENST00000446267 564 ntBASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 RN7SL277P-201ENST00000481521 288 ntBASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AP000911.2-201ENST00000534330 502 ntBASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AL591471.1-201ENST00000621855 229 ntBASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms