Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 SNHG9-202ENST00000564014 471 ntBASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AC060814.4-201ENST00000594169 2163 ntBASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRCH1Q9Y2L9 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 PCDHB19P-202ENST00000625133 2914 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AC092474.2-201ENST00000424288 719 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 DNAJB3-202ENST00000449667 1266 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 MYADML-201ENST00000474610 2147 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AP000344.2-201ENST00000512987 629 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 FAM86C2P-203ENST00000528684 1004 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AL161645.1-201ENST00000622716 1255 ntBASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRCH1Q9Y2L9 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms