Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC003102.2-201ENST00000589195 1469 ntBASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FXNP2-201ENST00000411625 547 ntBASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 MIR4722-201ENST00000578292 60 ntBASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 AC020922.3-201ENST00000595064 547 ntBASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.79■□□□□ 0.12
SSX2IPQ9Y2D8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 LINC01101-201ENST00000622953 1884 ntBASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 RPS2P36-201ENST00000456516 831 ntBASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 MIR6720-201ENST00000611664 98 ntBASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSX2IPQ9Y2D8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SALL4P5-201ENST00000419001 1760 ntBASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 WASH3P-207ENST00000560956 1394 ntBASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSX2IPQ9Y2D8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms