Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 AL390755.1-201ENST00000623716 2027 ntBASIC14.65□□□□□ -0.06
SPASTQ9UBP0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
SPASTQ9UBP0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 DPM3-202ENST00000368399 517 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 CYP46A4P-201ENST00000414953 267 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 FAM58BP-201ENST00000439056 645 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AC013355.1-201ENST00000562625 723 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 DUX4L46-201ENST00000566845 751 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AC008825.2-201ENST00000603374 718 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AL136295.7-201ENST00000619226 1200 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AL162426.1-201ENST00000624141 743 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AC100757.4-201ENST00000626934 759 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 AC138627.1-207ENST00000641560 1006 ntBASIC14.64□□□□□ -0.07
SPASTQ9UBP0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPASTQ9UBP0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 INE2-201ENST00000630399 1874 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AC015656.1-201ENST00000624209 3578 ntBASIC14.63□□□□□ -0.07
SPASTQ9UBP0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPASTQ9UBP0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms